Genome-Wide Identification and Comparative Analysis of Copper Transporter Genes in Plants

Basit Öğe Kaydı
dc.contributor.authorVatansever, Recep
dc.contributor.authorÖzyiğit, İbrahim İlker
dc.contributor.authorFiliz, Ertuğrul
dc.date.accessioned2020-05-01T12:10:13Z
dc.date.available2020-05-01T12:10:13Z
dc.date.issued2017
dc.departmentDÜ, Çilimli Meslek Yüksekokulu, Bitkisel ve Hayvansal Üretim Bölümüen_US
dc.descriptionFiliz, Ertugrul/0000-0001-9636-6389; Ozyigit, Ibrahim Ilker/0000-0002-0825-5951en_US
dc.descriptionWOS: 000401323800011en_US
dc.descriptionPubMed: 26857867en_US
dc.description.abstractCopper (Cu) transporters have primary importance in maintenance of physiological limits of Cu home-ostasis in plants. However, structural characterization of Cu transporters in many plant species is still limited. In this study, a total of 78 potential Cu transporter genes were identified from 18 different plant species. Study revealed that Cu transporters could be characterized with a CTR protein family (PF04145) domain, three putative transmembrane domains (TMDs), a single exon number, and a basic character. Met-rich motifs at N-terminal region, MXXXM motif in TMD-2, and GXXXG motif in TMD-3 could be essential for Cu transport since they were highly conserved in all analyzed species. In phylogeny, a clear distinction was observed between Cu transporter sequences of lower and higher plants. General topological features of Cu transporters in higher plants-monocots and dicots-were highly conserved compared to lower plants. Identification of Cu transporter homologous in various plant species and their comparative analysis at gene and protein levels will become valuable theoretical basis for future studies aiming to further characterization and molecular manipulation of Cu transporters.en_US
dc.identifier.doi10.1007/s12539-016-0150-2en_US
dc.identifier.endpage291en_US
dc.identifier.issn1913-2751
dc.identifier.issn1867-1462
dc.identifier.issue2en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage278en_US
dc.identifier.urihttps://doi.org/10.1007/s12539-016-0150-2
dc.identifier.urihttps://hdl.handle.net/20.500.12684/6086
dc.identifier.volume9en_US
dc.identifier.wosWOS:000401323800011en_US
dc.identifier.wosqualityQ4en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakPubMeden_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherSpringer Heidelbergen_US
dc.relation.ispartofInterdisciplinary Sciences-Computational Life Sciencesen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectMotif signatureen_US
dc.subjectTransmembrane domain (TMD)en_US
dc.subjectN-terminalen_US
dc.subjectC-terminalen_US
dc.titleGenome-Wide Identification and Comparative Analysis of Copper Transporter Genes in Plantsen_US
dc.typeArticleen_US

Dosyalar

Orijinal paket
Listeleniyor 1 - 1 / 1
Küçük Resim Yok
İsim:
6086.pdf
Boyut:
5.01 MB
Biçim:
Adobe Portable Document Format
Açıklama:
Tam Metin / Full Text
İndir

Koleksiyon

WoS İndeksli Yayınlar Koleksiyonu
Makale Koleksiyonu
PubMed İndeksli Yayınlar Koleksiyonu
Scopus İndeksli Yayınlar Koleksiyonu