Genome-wide analyses of ATP sulfurylase (ATPS) genes in higher plants and expression profiles in sorghum (Sorghum bicolor) under cadmium and salinity stresses

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dc.contributor.authorAkbudak, M. Aydın
dc.contributor.authorFiliz, Ertuğrul
dc.date.accessioned2020-05-01T12:10:12Z
dc.date.available2020-05-01T12:10:12Z
dc.date.issued2019
dc.departmentDÜ, Çilimli Meslek Yüksekokulu, Bitkisel ve Hayvansal Üretim Bölümüen_US
dc.descriptionAkbudak, M. Aydin/0000-0002-1397-4678; Filiz, Ertugrul/0000-0001-9636-6389en_US
dc.descriptionWOS: 000475294900007en_US
dc.descriptionPubMed: 29550498en_US
dc.description.abstractATP sulfurylase (ATPS, EC: 2.7.7.4) is a crucial enzyme for sulfate assimilation pathway in both plastids and cytosol in plants. In this study, genome-wide and comparative analyses of ATPSs in 11 higher plant species, including sequence and structural analyses have been performed. Expression of ATPS genes in sorghum under cadmium (Cd) and salinity (NaCl) stresses were also investigated to provide a model experimental data for the regulation of ATPS genes under stress conditions. Thirty-one ATPS genes from 11 plant species were found. It showed that ATPSs from different species have high sequence divergences, which cause structural differences among them. Phylogenetic analysis has shown that there are two major types of ATPSs evolved in dicots while monocots were evolved to have one type of ATPs. Finally, expression analysis of ATPS genes revealed tissue and stress dependent expression pattern, which indicates expressions of ATPS genes are tightly regulated.en_US
dc.identifier.doi10.1016/j.ygeno.2018.03.013en_US
dc.identifier.endpage589en_US
dc.identifier.issn0888-7543
dc.identifier.issn1089-8646
dc.identifier.issue4en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage579en_US
dc.identifier.urihttps://doi.org/10.1016/j.ygeno.2018.03.013
dc.identifier.urihttps://hdl.handle.net/20.500.12684/6077
dc.identifier.volume111en_US
dc.identifier.wosWOS:000475294900007en_US
dc.identifier.wosqualityQ1en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakPubMeden_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherAcademic Press Inc Elsevier Scienceen_US
dc.relation.ispartofGenomicsen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectATP sulfurylaseen_US
dc.subjectProtein diversityen_US
dc.subjectSalinityen_US
dc.subjectCadmiumen_US
dc.subjectSulfur metabolismen_US
dc.subjectGene expressionen_US
dc.titleGenome-wide analyses of ATP sulfurylase (ATPS) genes in higher plants and expression profiles in sorghum (Sorghum bicolor) under cadmium and salinity stressesen_US
dc.typeArticleen_US

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