Assessment of the genetic relationship of Turkish olives (Olea europaea subsp europaea) cultivars based on cpDNA trnL-F regions

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dc.contributor.authorKaya, Ergün
dc.contributor.authorVatansever, Recep
dc.contributor.authorFiliz, Ertuğrul
dc.date.accessioned2020-04-30T22:39:49Z
dc.date.available2020-04-30T22:39:49Z
dc.date.issued2018
dc.departmentDÜ, Çilimli Meslek Yüksekokulu, Bitkisel ve Hayvansal Üretim Bölümüen_US
dc.descriptionWOS: 000429885800011en_US
dc.description.abstractThe olive tree (Olea europaea L.) is one of the major cultivated species in the world, and Mediterranean countries produce about 90% of world cultivated olives. In this study, the genetic relationship of seven Turkish olive cultivars was investigated using non-coding trnL-F regions in chloroplastic genome. Cultivars demonstrated a similar sequence length of 330-340 bp with an average 35.26% G+C content. Variable (polymorphic/segregating), parsimony informative and total numbers of the insertion or the deletion of bases in the DNA (indel sites) were 4, 3, and 28, respectively. Nucleotide diversities p and. were found as 0.00631 and 0.00644 respectively, while Tajima's D was -0.786. cpDNA trnL-F regions of sequenced Turkish olive cultivars had a low level of genetic variations, and these non-coding regions were strictly conserved in all analyzed cultivars. Geographically distant shared more sequence similarities than relatively close cultivars. The phylogenetic analyses indicated that the biogeographic distribution of cultivars does not demonstrate any association inferring cultivar source. These results indicate the possibility of germplasm exchanges among countries or that some indel mutations contribute to variations of the Turkish olive gene pool. Thus, the authorities should develop the necessary programs to preserve the purity of native germplasms.en_US
dc.identifier.doi10.1515/botcro-2017-0019en_US
dc.identifier.endpage92en_US
dc.identifier.issn0365-0588
dc.identifier.issn1847-8476
dc.identifier.issue1en_US
dc.identifier.scopusqualityQ3en_US
dc.identifier.startpage88en_US
dc.identifier.urihttps://doi.org/10.1515/botcro-2017-0019
dc.identifier.urihttps://hdl.handle.net/20.500.12684/2834
dc.identifier.volume77en_US
dc.identifier.wosWOS:000429885800011en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherUniv Zagreb, Fac Science, Div Biologyen_US
dc.relation.ispartofActa Botanica Croaticaen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectgermplasmen_US
dc.subjectintergenicen_US
dc.subjectlineageen_US
dc.subjectnon-coding trnL-Fen_US
dc.subjectpairwiseen_US
dc.subjectplastomeen_US
dc.titleAssessment of the genetic relationship of Turkish olives (Olea europaea subsp europaea) cultivars based on cpDNA trnL-F regionsen_US
dc.typeArticleen_US

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