Assessment of the genetic relationship of Turkish olives (Olea europaea subsp europaea) cultivars based on cpDNA trnL-F regions
Yükleniyor...
Dosyalar
Tarih
2018
Yazarlar
Dergi Başlığı
Dergi ISSN
Cilt Başlığı
Yayıncı
Univ Zagreb, Fac Science, Div Biology
Erişim Hakkı
info:eu-repo/semantics/openAccess
Özet
The olive tree (Olea europaea L.) is one of the major cultivated species in the world, and Mediterranean countries produce about 90% of world cultivated olives. In this study, the genetic relationship of seven Turkish olive cultivars was investigated using non-coding trnL-F regions in chloroplastic genome. Cultivars demonstrated a similar sequence length of 330-340 bp with an average 35.26% G+C content. Variable (polymorphic/segregating), parsimony informative and total numbers of the insertion or the deletion of bases in the DNA (indel sites) were 4, 3, and 28, respectively. Nucleotide diversities p and. were found as 0.00631 and 0.00644 respectively, while Tajima's D was -0.786. cpDNA trnL-F regions of sequenced Turkish olive cultivars had a low level of genetic variations, and these non-coding regions were strictly conserved in all analyzed cultivars. Geographically distant shared more sequence similarities than relatively close cultivars. The phylogenetic analyses indicated that the biogeographic distribution of cultivars does not demonstrate any association inferring cultivar source. These results indicate the possibility of germplasm exchanges among countries or that some indel mutations contribute to variations of the Turkish olive gene pool. Thus, the authorities should develop the necessary programs to preserve the purity of native germplasms.
Açıklama
WOS: 000429885800011
Anahtar Kelimeler
germplasm, intergenic, lineage, non-coding trnL-F, pairwise, plastome
Kaynak
Acta Botanica Croatica
WoS Q Değeri
Q3
Scopus Q Değeri
Q3
Cilt
77
Sayı
1
