Complete Chloroplast Genomes and Comparative Analyses of Three Ornamental Impatiens Species

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dc.authorwosidLi, xinyi/HJG-4670-2022
dc.authorwosidli, xin/HHS-9461-2022
dc.authorwosidli, xinyi/GWZ-8941-2022
dc.contributor.authorLuo, Chao
dc.contributor.authorHuang, Wulue
dc.contributor.authorYer, Hüseyin
dc.contributor.authorKamuda, Troy
dc.contributor.authorLi, Xinyi
dc.contributor.authorLi, Yang
dc.contributor.authorRong, Yuhong
dc.date.accessioned2023-07-26T11:50:55Z
dc.date.available2023-07-26T11:50:55Z
dc.date.issued2022
dc.departmentDÜ, Orman Fakültesi, Orman Mühendisliği Bölümüen_US
dc.description.abstractImpatiens L., the largest genus in the family Balsaminaceae with approximately 1,000 species, is a controversial genus. Due to the conflict of morphological features and insufficient genomic resources, the studies of systematic evolution and understanding of taxonomic identification are considered to be very limited. Hence, we have sequenced the complete chloroplast genomes of three ornamental species (Impatiens balsamina, I. hawkeri, and I. walleriana), and compared them with previously published wild species data. We performed a detailed comparison of a highly similar basic structure, size, GC content, gene number, order, and functional array among them. Similarly, most divergent genes were detected from previous work in the literature. The mutational regions containing highly variable nucleotide hotspots were identified and may be used as potential markers for species identification and taxonomy. Furthermore, using whole chloroplast genome data to analysis the phylogenetic relationship of the Balsaminaceae species, we found that they were all part of a single clade. The three phenotypically different ornamental species were clustered together, suggesting that they were very likely to be closely related. We achieved and characterized the plastid genome structure, identified the divergence hotspots, and determined the phylogenetic and taxonomic positions of the three cultivated species in the Impatiens genus. The results may show that the chloroplast genome can be used to solve phylogenetic problems in or between the Impatiens genus and also provide genomic resources for the study of the Balsaminaceae family's systematics and evolution.en_US
dc.identifier.doi10.3389/fgene.2022.816123
dc.identifier.issn1664-8021
dc.identifier.pmid35432470en_US
dc.identifier.scopus2-s2.0-85128477590en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.urihttps://doi.org/10.3389/fgene.2022.816123
dc.identifier.urihttps://hdl.handle.net/20.500.12684/12455
dc.identifier.volume13en_US
dc.identifier.wosWOS:000783973500001en_US
dc.identifier.wosqualityQ2en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakPubMeden_US
dc.indekslendigikaynakScopusen_US
dc.institutionauthorYer, Hüseyin
dc.language.isoenen_US
dc.publisherFrontiers Media Saen_US
dc.relation.ispartofFrontiers In Geneticsen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.snmz$2023V1Guncelleme$en_US
dc.subjectImpatiens; Balsaminaceae; Chloroplast Genome; Comparative Analysis; Phylogenetic Relationshipen_US
dc.subjectMultiple Sequence Alignment; Glandulifera Royle; Balsaminaceae; Phylogeny; Annotation; Diversityen_US
dc.titleComplete Chloroplast Genomes and Comparative Analyses of Three Ornamental Impatiens Speciesen_US
dc.typeArticleen_US

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