Mitochondrial iron transporter (MIT) gene in potato (Solanum tuberosum): comparative bioinformatics, physiological and expression analyses in response to drought and salinity

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dc.authorid/0000-0002-1406-0915
dc.authoridYıldız, Kübra/0000-0002-2958-7058
dc.contributor.authorKurt, Fırat
dc.contributor.authorKurt, Barış
dc.contributor.authorFiliz, Ertuğrul
dc.contributor.authorYıldız, Kübra
dc.contributor.authorAkbudak, Mehmet Aydın
dc.date.accessioned2023-07-26T11:51:34Z
dc.date.available2023-07-26T11:51:34Z
dc.date.issued2022
dc.departmentDÜ, Meslek Yüksekokulu, Bitkisel ve Hayvansal Üretim Bölümüen_US
dc.description.abstractMitochondrial iron transporter (MIT) genes are essential for mitochondrial acquisition/import of iron and vital to proper functioning of mitochondria. Unlike other organisms, research on the MITs in plants is limited. The present study provides comparative bioinformatics assays for the potato MIT gene (StMIT) as well as gene expression analyses. The phylogenetic analyses revealed monocots-dicot divergence in MIT proteins and it was also found clade specific motif diversity. In addition, docking analyses indicated that Asp172 and Gly100 residues to be identified as the closest residues binding to ferrous iron. The percentage of structure overlap of the StMIT 3D protein model with Arabidopsis, maize and rice MIT proteins was found between 80.18% and 85.71%. The transcript analyses exhibited that the expression of StMIT was triggered under drought and salinity stresses. The findings of the present study would provide valuable leads for further studies targeting specifically the MIT gene and generally the plant iron metabolism.en_US
dc.identifier.doi10.1007/s10534-022-00411-7
dc.identifier.endpage887en_US
dc.identifier.issn0966-0844
dc.identifier.issn1572-8773
dc.identifier.issue5en_US
dc.identifier.pmid35764832en_US
dc.identifier.scopus2-s2.0-85133030837en_US
dc.identifier.scopusqualityQ1en_US
dc.identifier.startpage875en_US
dc.identifier.urihttps://doi.org/10.1007/s10534-022-00411-7
dc.identifier.urihttps://hdl.handle.net/20.500.12684/12585
dc.identifier.volume35en_US
dc.identifier.wosWOS:000817827700001en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakPubMeden_US
dc.indekslendigikaynakScopusen_US
dc.institutionauthorFiliz, Ertuğrul
dc.language.isoenen_US
dc.publisherSpringeren_US
dc.relation.ispartofBiometalsen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.snmz$2023V1Guncelleme$en_US
dc.subjectMitoferrin; Mitochondrial Carrier Family; Iron Homeostasis; In Silico Analysesen_US
dc.subjectPrediction; Acid; Mechanisms; Tolerance; Genotypes; Enzymes; Leaves; Sites; Sumoen_US
dc.titleMitochondrial iron transporter (MIT) gene in potato (Solanum tuberosum): comparative bioinformatics, physiological and expression analyses in response to drought and salinityen_US
dc.typeArticleen_US

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