Genome-wide exploration and analysis of plant stress-responsive CAMTA transcription factor genes in Brachypodium distachyon and their expression patterns under environmental challenges

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dc.authoridFiliz, Ertugrul/0000-0001-9636-6389en_US
dc.authoridSrivastava, Vibha/0000-0002-3031-6984en_US
dc.authorscopusid8856341800en_US
dc.authorscopusid57206274614en_US
dc.authorscopusid23984566200en_US
dc.authorscopusid55425990300en_US
dc.authorwosidcetin, durmus/IAP-8194-2023en_US
dc.authorwosidFiliz, Ertugrul/I-9440-2016en_US
dc.contributor.authorAkbudak, M. Aydin
dc.contributor.authorCetin, Durmus
dc.contributor.authorFiliz, Ertugrul
dc.contributor.authorSrivastava, Vibha
dc.date.accessioned2024-08-23T16:04:33Z
dc.date.available2024-08-23T16:04:33Z
dc.date.issued2024en_US
dc.departmentDüzce Üniversitesien_US
dc.description.abstractCalmodulin-binding transcription activators (CAMTAs) is a family of transcriptional factors, which are highly sensitive to various stressors and hormone signals. They are involved in regulating plant growth, development, stress response, and have distinct biological roles in different plant compartments. Although the gene families coding the CAMTA transcription factors have been identified and functionally characterized in many plant species, it has not been previously reported in Brachypodium distachyon, which is a model organism for genomic research in cereals and grasses. In the present study, seven novel CAMTA genes were identified in the B. distachyon genome, all of which contain the CG-1 (pfam03859) domain. Their sequence details were provided with exon numbers ranging from 10 to 13 and protein length varying from 836 to 1034 amino acid residues. All BdCAMTA proteins, except BdCAMTA1, were found to be acidic and localized to the nucleus. The BdCAMTA genes exhibit diverse responses to cold, drought, and salinity stresses, without being specific to any stress. Therefore, upcoming studies should prioritize the investigation of molecular mechanisms governing functional specificity and redundancy among individual members of CAMTA. These findings establish a valuable scientific foundation for future research concerning the roles of the CAMTA gene family in plants. (c) 2024 SAAB. Published by Elsevier B.V. All rights reserved.en_US
dc.description.sponsorshipAkdeniz University Scientific Research Projects Coordination Unit competitive grant [FBA -2022- 6021]en_US
dc.description.sponsorshipFunding This work was supported by Akdeniz University Scientific Research Projects Coordination Unit competitive grant #FBA -2022- 6021 to MAA.en_US
dc.identifier.doi10.1016/j.sajb.2024.01.048
dc.identifier.endpage217en_US
dc.identifier.issn0254-6299
dc.identifier.issn1727-9321
dc.identifier.scopus2-s2.0-85183096132en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage208en_US
dc.identifier.urihttps://doi.org/10.1016/j.sajb.2024.01.048
dc.identifier.urihttps://hdl.handle.net/20.500.12684/14266
dc.identifier.volume166en_US
dc.identifier.wosWOS:001173867500001en_US
dc.identifier.wosqualityN/Aen_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherElsevieren_US
dc.relation.ispartofSouth African Journal of Botanyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectCAMTA gene familyen_US
dc.subjectBrachypodium distachyonen_US
dc.subjectStressen_US
dc.subjectColden_US
dc.subjectSalten_US
dc.subjectDroughten_US
dc.subjectActivator Genesen_US
dc.subjectCalmodulinen_US
dc.subjectDroughten_US
dc.subjectIdentificationen_US
dc.subjectProlineen_US
dc.subjectToleranceen_US
dc.subjectCalciumen_US
dc.subjectFamilyen_US
dc.subjectInformationen_US
dc.subjectProteinsen_US
dc.titleGenome-wide exploration and analysis of plant stress-responsive CAMTA transcription factor genes in Brachypodium distachyon and their expression patterns under environmental challengesen_US
dc.typeArticleen_US

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