In silico identification and comparative analysis of molybdenum (Mo) transporter genes in plants

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dc.contributor.authorVatansever, Recep
dc.contributor.authorFiliz, Ertuğrul
dc.contributor.authorÖzyiğit, İbrahim İlker
dc.date.accessioned2020-04-30T23:18:27Z
dc.date.available2020-04-30T23:18:27Z
dc.date.issued2016
dc.departmentDÜ, Çilimli Meslek Yüksekokulu, Bitkisel ve Hayvansal Üretim Bölümüen_US
dc.descriptionFiliz, Ertugrul/0000-0001-9636-6389; Ozyigit, Ibrahim Ilker/0000-0002-0825-5951en_US
dc.descriptionWOS: 000373897100009en_US
dc.description.abstractMolybdenum (Mo) is an essential micronutrient element required by plants at trace amounts. Studies of Mo transporters mainly refer to the general characteristics of sulfate transporters because of limited knowledge about these proteins. In this study, we have identified 39 potential Mo transporter-like genes from 17 plant species by homology search. We report that Mo transporter proteins could be characterized with their Sulfate_transp and/or SUL1 protein domain family, 7-10 putative TMDs, basic characteristics, and mainly single exon number. In addition, we have searched the highly conserved residues in identified Mo sequences. These conserved residues could be used as potential motif signatures in identification of Mo transporter sequences. Phylogenetic analysis demonstrated a clear distinction between lower and higher plants in Mo transporter sequences. Despite some structural variations, general topological features of Mo transporters in higher and lower plants are not much divergent among 17 species. Identification of Mo transporter genes/proteins in various plant species, and their comparative analysis will provide valuable theoretical knowledge for future studies of better characterization of Mo transporters.en_US
dc.identifier.doi10.1007/s40415-015-0217-zen_US
dc.identifier.endpage99en_US
dc.identifier.issn0100-8404
dc.identifier.issn1806-9959
dc.identifier.issue1en_US
dc.identifier.scopusqualityQ3en_US
dc.identifier.startpage87en_US
dc.identifier.urihttps://doi.org/10.1007/s40415-015-0217-z
dc.identifier.urihttps://hdl.handle.net/20.500.12684/3322
dc.identifier.volume39en_US
dc.identifier.wosWOS:000373897100009en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherSoc Botanica Sao Pauloen_US
dc.relation.ispartofBrazilian Journal Of Botanyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectConserved domainen_US
dc.subjectMolybdateen_US
dc.subjectMotif signatureen_US
dc.subjectTransmembrane domainen_US
dc.titleIn silico identification and comparative analysis of molybdenum (Mo) transporter genes in plantsen_US
dc.typeArticleen_US

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