Genetic diversity and phylogenetic analysis of Robinia pseudoacacia L. populations using ISSR markers, ITS1 and trnL-F intergenic spacer sequences

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dc.authoridFiliz, Ertugrul/0000-0001-9636-6389en_US
dc.authoridOzyigit, Ibrahim Ilker/0000-0002-0825-5951en_US
dc.authoridUras, Mehmet Emin/0000-0002-0444-9994en_US
dc.authorscopusid57190445078en_US
dc.authorscopusid23984566200en_US
dc.authorscopusid57190445254en_US
dc.authorscopusid6506190774en_US
dc.authorwosidFiliz, Ertugrul/I-9440-2016en_US
dc.contributor.authorUras, Mehmet Emin
dc.contributor.authorFiliz, Ertugrul
dc.contributor.authorSen, Ugur
dc.contributor.authorOzyigit, Ibrahim Ilker
dc.date.accessioned2024-08-23T16:03:54Z
dc.date.available2024-08-23T16:03:54Z
dc.date.issued2024en_US
dc.departmentDüzce Üniversitesien_US
dc.description.abstractRobinia pseudoacacia L. is a deciduous tree planted almost all around the world for a wide variety of uses such as ornamental in urban ecosystems and forest trees in afforestation. This study aims to evaluate the genetic diversity and phylogenetic relations of R. pseudoacacia using some selected populations in Istanbul and Kocaeli cities. For this aim, molecular marker-assisted and DNA sequence-based analyses were performed. According to the results, nine of 15 inter simple sequence repeats (ISSR) primers gave clear and distinguishable bands with a total of 100 loci. The percentage of polymorphic loci (PPL) was calculated as 100% for multi-populations and ranged from 46% to 76% for single populations. Nei's gene diversity value was calculated between 0.165 and 0.251. The lowest and highest PPL were found in populations of Barbaros Boulevard and Dilovasi District, respectively. Population structure analysis showed seven different genetic structures for five populations. Internal transcribed spacer 1 region (ITS1) and trnL-F intergenic spacer region were used to examine the phylogenetic relationships of R. pseudoacacia, and both regions showed a high discriminative power at the family level. Based on the findings, R. pseudoacacia, as a forest tree residing in the urban ecosystem, may face the risk of population decline in the upcoming years due to its moderate/low genetic diversity and susceptibility to environmental pressures.en_US
dc.identifier.doi10.17221/95/2023-JFS
dc.identifier.endpage13en_US
dc.identifier.issn1212-4834
dc.identifier.issn1805-935X
dc.identifier.issue1en_US
dc.identifier.scopus2-s2.0-85183999970en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage1en_US
dc.identifier.urihttps://doi.org/10.17221/95/2023-JFS
dc.identifier.urihttps://hdl.handle.net/20.500.12684/13973
dc.identifier.volume70en_US
dc.identifier.wosWOS:001165972400001en_US
dc.identifier.wosqualityN/Aen_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherCzech Academy Agricultural Sciencesen_US
dc.relation.ispartofJournal of Forest Scienceen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectDNA barcodingen_US
dc.subjectforest treeen_US
dc.subjectmolecular markeren_US
dc.subjectmolecular phylogenyen_US
dc.subjecturban populationen_US
dc.titleGenetic diversity and phylogenetic analysis of Robinia pseudoacacia L. populations using ISSR markers, ITS1 and trnL-F intergenic spacer sequencesen_US
dc.typeArticleen_US

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